Pseudoproline dipeptides are extremely simple to use. They are introduced into the peptide sequence using standard coupling methods, substituting any Aaa-Ser or Aaa-Thr dipeptide. Experience has led to the development of the following empirical guidelines for their use: - Optimal results are obtained if the PPs are spaced 5-6 residues apart throughout the sequence.
- The optimum separation between a PP and a Pro residue is 5-6 amino acid residues.
- The minimum separation between a PP and another PP or Pro residue is 2 residues.
- Aim to insert a PP before regions of hydrophobic residues.
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